Note: this is a purely anecdotal posting about our struggles with some performance bottlenecks in the last few months. If you’re not interested in such background information, just skip.
You might have noticed that since about January 2012 using our file and mail servers hasn’t been as smooth as usual. This posting will give you some background information concerning the challenges we encountered and why it took so long to fix them. Let’s begin with the file server.
Way back in the days (i.e. 5 years ago), when the total file server data volume at D-PHYS was about 10 TB, we used individual file server to store this data. When one server was full, we got a bigger one, copied all the data and life was good for another year or two. Today, the file server data volume (home and group shares) is above 150 TB and growing fast and this strategy doesn’t work any longer: individual servers don’t scale and copying this amount of data alone takes weeks. That’s why in 2009 we started migrating the ‘many individual servers’ setup to a SAN architecture in which the file servers are just huge hard drives (iSCSI over Infiniband, for the technically inclined) connected to a frontend server that manages space allocation and the file system. The same is true for the backup infrastructure, where the data volume is even bigger.
This new setup had to be developed, tested and put in place as seamlessly and unobtrusively as possible while ensuring data access at all times (apart from single hour-long migrations). The SAN architecture was implemented for Astro in December 2010 and has been running beautifully ever since. In 2011 we laid the groundwork to adopt this system for the rest of D-PHYS’s home and group shares and after a long and thorough testing period the rollout happened on January 5, 2012. Unfortunately, that’s when things got ugly.
At first, we noticed some exotic file access problems on 32bit workstations. It took us some time to understand that the underlying issue was an incompatibility with the new filesystem using 64-bit addresses for the data blocks. As a consequence we had to replace the filesystem of the home shares. Independently we ran into serious I/O issues with the installed operating system, so we had to upgrade the kernel of the frontend server and move the home directories onto a dedicated server. In parallel, we had to incorporate some huge chunks of group data while always making sure that nightly backups were available. All this necessitated a few more migrations until we finally achieved a stable system on March 28.
The upshot: what we had hoped to be a fast and easy migration turned out to cause a lot of problems and take much longer than anticipated, but now we have a stable and solid setup that will scale up to hundreds or even thousands of TB of data.
See live volume management and usage graphs for our file servers.
As for the mail server, matters are to some extent related and partly just coincidental in time. The IMAP server does need access to the home directories and hence also suffered when their performance was impaired. But even after having solved the file server issues, we still saw single load peaks on the IMAP server that prevented our users from working with their email. Again, we put a lot of time and effort into finding the reason. As of April 13, we’re back to good performance and arrive at the following set of conclusions:
- a covertly faulty harddisk in the mail server RAID seems to have impaired performance
- CPU load of the individual virtual machines on the mail server was not distributed across the available CPU cores in an optimal way
General mail server load:
- while incoming mail volume doesn’t increase much, outgoing mails have grown 50% in the last year alone
- more and more sophisticated spam requires more thorough virus and spam scanning, increasing the load on the mail server
- our users have amassed 1.1 TB of mail storage (up from 400 GB in January 2010), which need to be accessed and organized
We’d like to thank you for your patience during the last 4 months and apologize for any inconvenience you might have had to endure. In all likelihood the systems will be a lot more stable in the future, but of course we’re constantly working to ensure the D-PHYS IT infrastructure is able to keep up with the fast growing demand of disk space (the data volume has tripled in the last year alone). We’ve learned a lot and we’ll put it to good use.